PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913102.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 550aa    MW: 59432.2 Da    PI: 6.3604
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913102.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09368415455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_010913102.1 368 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 415
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.19E-17362433IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.24E-11362419No hitNo description
PROSITE profilePS5088815.663364414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-17364431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-6368415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-10370420IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MEKERFCSTT PPLTWQSGNP LPPPEPEMTS LPGADRFHNL NWDRPMDRSA PFESALSSLV  60
SSPSSNLATT AASDSVVLHE LICRLGSICN SDEISLTSCY QSANTSCSST PLNSPPKLNL  120
SMMEHYQQSS RGLPVSRNPA MPTLHLAPFT TDPGFAERAV RFSCFGGRSY GGLTGQFGLP  180
EIGKMSRVSS SQSFMGSGCQ MGISDNGQEI AMQEGVQVEM EMRYRLGGRM SGSSTPDNGE  240
FGGGQEESSA DQITAGGETS SRGNKENNAR KRKAAPKGKG KEAPLSSSGT NPSKIAEEED  300
SNAKRSKPAE TNGTDQDVAA KPKAEQNGGA SSGGDAGQKL GKENNAKPPE PPKDYIHVRA  360
RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK AVMLDEIINY VQSLQRQVEF  420
LSMKLATVNP QLDFSMENLL PKDMHQAHRP LPTQVYPLEA ISTAFSCPHQ PQGNPLQSVV  480
TNGLENQCSL NPLNSSLRRS LNMQLPPFDG SGDATSQLGT FWEDDLQSFI QMGFGQSQEN  540
SFSSQGFHGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913102.10.0transcription factor bHLH78 isoform X1
TrEMBLA0A2H3ZGH60.0A0A2H3ZGH6_PHODC; transcription factor bHLH62-like isoform X4
STRINGXP_008813504.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.14e-58bHLH family protein