PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907868.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 338aa    MW: 38142.6 Da    PI: 9.6407
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907868.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.77.4e-3059114255
         G2-like   2 prlrWtpeLHerFveaveqLGGsek..AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtpeLH +Fv+ave+LGG+++  AtPk +lelmkvkgL+++hvkSHLQ+YR+
  XP_010907868.1  59 PRLRWTPELHLCFVQAVERLGGQDHagATPKMVLELMKVKGLSIAHVKSHLQMYRS 114
                     9*********************998446***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.34555117IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-2855115IPR009057Homeodomain-like
SuperFamilySSF466891.79E-1456115IPR009057Homeodomain-like
TIGRFAMsTIGR015578.3E-2358116IPR006447Myb domain, plants
PfamPF002491.6E-860113IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MRSMSSESSR GRPSKVGEVE EDGEDNLRNG GSSSNSTVEE SERKPSSGTV RQYVRSKNPR  60
LRWTPELHLC FVQAVERLGG QDHAGATPKM VLELMKVKGL SIAHVKSHLQ MYRSKKIDES  120
GQVIADPWSV MKGTKQHIYN LGHLPMLHGC HQRPTIPNLR SDGSSWFGHR NWTQNPVLSR  180
AMNSTVGSRS HGSINEMIFR GSDRLKSNQD FHINTSSSNH QAICELREAT GESHLLHNCR  240
LGTTQYQAEE RGAYLQERGL TGPEGQSSER WKANDQGPDL NLSLHIGPRQ EKKQQRRWEE  300
ELESSLSLSL FGPSRMERCS RDVEKGLKSW HVGGRSWQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-1660116458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907868.10.0transcription activator GLK2 isoform X3
TrEMBLA0A3Q0HQN81e-157A0A3Q0HQN8_PHODC; transcription repressor KAN1-like isoform X1
STRINGGSMUA_Achr7P22410_0018e-80(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.17e-42G2-like family protein