PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010547467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | ZF-HD | ||||||||
Protein Properties | Length: 251aa MW: 28206.9 Da PI: 9.4672 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 98.4 | 5.3e-31 | 74 | 128 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 rY+eC++NhAa +Gg ++DGCgEfmp gee t++alkCaACgCHR+FHR+ev+ XP_010547467.1 74 SRYRECQRNHAAVTGGLVIDGCGEFMPG-GEEDTPDALKCAACGCHRSFHRKEVDG 128 69*************************9.8888*******************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 5.0E-19 | 73 | 128 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 2.9E-28 | 74 | 126 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.3E-27 | 75 | 126 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 25.151 | 76 | 125 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Gene3D | G3DSA:1.10.10.60 | 5.4E-26 | 171 | 245 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.86E-17 | 173 | 245 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01565 | 4.9E-25 | 184 | 241 | IPR006455 | Homeodomain, ZF-HD class |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MEFEGKANAV ILSTTPSKTL DHIRRHPPPD PKPEPDPDPD PVSASPPTPP SPPAVSAAQR 60 PSTRSELTAR LLRSRYRECQ RNHAAVTGGL VIDGCGEFMP GGEEDTPDAL KCAACGCHRS 120 FHRKEVDGQD SQTAAYMYAQ RTAPALYCSG SYRAMQTHAM HRTAGIARRS SSSEEMNDEK 180 RSGKKRLRTK INQEQKDKMK EFAERLGWSL QKKDEEEVDK FCSMVNLRRE VFKVWMHNNK 240 QAMKRKLSLP N |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wh7_A | 6e-18 | 185 | 242 | 18 | 75 | ZF-HD homeobox family protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010547467.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010547467.1 | 0.0 | PREDICTED: zinc-finger homeodomain protein 7-like | ||||
Swissprot | Q9SVL0 | 5e-75 | ZHD7_ARATH; Zinc-finger homeodomain protein 7 | ||||
TrEMBL | A0A078GV38 | 1e-75 | A0A078GV38_BRANA; BnaC07g31930D protein | ||||
TrEMBL | A0A0D3DDV9 | 1e-75 | A0A0D3DDV9_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6F8P5 | 1e-75 | A0A3P6F8P5_BRAOL; Uncharacterized protein | ||||
STRING | XP_010547467.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM13854 | 15 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50890.1 | 8e-69 | homeobox protein 28 |