PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010535324.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | AP2 | ||||||||
Protein Properties | Length: 200aa MW: 22306.9 Da PI: 9.3682 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.9 | 1.9e-16 | 67 | 118 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_010535324.1 67 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 118 57****************988532...5************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.3E-9 | 1 | 33 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.84E-9 | 1 | 34 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 11.785 | 1 | 32 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0012 | 1 | 38 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.00E-11 | 1 | 34 | No hit | No description |
CDD | cd00018 | 9.12E-12 | 67 | 128 | No hit | No description |
Pfam | PF00847 | 7.9E-11 | 67 | 118 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-18 | 67 | 128 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 7.0E-19 | 68 | 127 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.111 | 68 | 126 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-30 | 68 | 132 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.1E-5 | 69 | 80 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.1E-5 | 108 | 128 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
YLGGYDKEDK AARAYDLAAL KYWGPTATTN FPISNYTKEM DEMKHSTKQE FIASLRRKSS 60 GFSRGASIYR GVTRHHQQGR WQARIGRVAG NKDLYLGTFA TEEEAAEAYD IAAIKFRGIN 120 AVTNFEMSRY DIEAIMKSSL PIGGAAKRLK LSSESSSSSD QNPGLTHQSS SDHIHLVQSY 180 GIPFEPAALY HQNHFQHLPA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010535324.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010523352.2 | 1e-145 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 | ||||
Refseq | XP_010535324.1 | 1e-149 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL7, partial | ||||
Refseq | XP_019056641.1 | 1e-145 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 | ||||
Refseq | XP_019056642.1 | 1e-145 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 | ||||
Swissprot | Q6J9N8 | 6e-93 | AIL7_ARATH; AP2-like ethylene-responsive transcription factor AIL7 | ||||
TrEMBL | A0A200PUI0 | 1e-98 | A0A200PUI0_9MAGN; AP2/ERF domain | ||||
TrEMBL | A0A445JL26 | 3e-99 | A0A445JL26_GLYSO; AP2-like ethylene-responsive transcription factor AIL7 isoform D | ||||
STRING | XP_010523352.1 | 1e-144 | (Tarenaya hassleriana) | ||||
STRING | XP_010535324.1 | 1e-148 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM553 | 27 | 140 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65510.1 | 1e-92 | AINTEGUMENTA-like 7 |
Publications ? help Back to Top | |||
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