PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010531110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 340aa MW: 38373.1 Da PI: 10.5503 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.8 | 1.1e-08 | 196 | 218 | 4 | 26 |
XCHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKka 26 + r +r++kNRe+A rsR+RK++ XP_010531110.1 196 DIRHKRMIKNRESAARSRARKQE 218 5689******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 1.13E-5 | 198 | 224 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-6 | 198 | 219 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 200 | 215 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence Send to blast |
MLPSAEQQGS HRVSDRNKNK NLNRVSSSTS SPSSSTSSSS LPTNSQTQNK HPTTMEEVWK 60 DITLSSLHHH QNPHDPRLGS HQAHDPNSIF QDFLNRPLNQ EPPASLSMGS SSNGDTSTAI 120 ALYGSPLPAP ATVLSLNSSA AFELLDNSDS HLLQNHPQLS SNVSSFTTPF EALASAGRFG 180 CYEKKRGQDS DGSSSDIRHK RMIKNRESAA RSRARKQECP SPLSLTPTSF LYDLRWGTNE 240 VFLHLRSFCI CGFRVLCFYR LIRMSWSLKL LTCRQKMQDS RENNISRGWR QHPSFPKRTS 300 FRGPQQLHFE KKKKSTSPSL FWCLNVFLME RKKGKFVPFF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010531110.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010531110.1 | 0.0 | PREDICTED: protein FD-like isoform X1 | ||||
Swissprot | Q84JK2 | 1e-56 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1J3HBH2 | 2e-65 | A0A1J3HBH2_NOCCA; Protein FD (Fragment) | ||||
TrEMBL | A0A1J3J4V9 | 5e-65 | A0A1J3J4V9_NOCCA; Protein FD (Fragment) | ||||
STRING | XP_010531110.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-55 | bZIP family protein |