PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010524047.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 291aa    MW: 32467.8 Da    PI: 6.6169
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010524047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.8e-11164207548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  XP_010524047.1 164 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 207
                     8999********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-13160224IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622162214IPR004827Basic-leucine zipper domain
PfamPF077163.2E-9162209IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-11164218No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-13164215No hitNo description
CDDcd147035.24E-24165215No hitNo description
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAQLPPKIPS IAQNWPDFSS SSAGAGQNPS WVDEFLDFSA SRRVNHRRSI SDSIAFLEAP  60
VTNHHLDRLD NDDDDQFIPM FSDDPHHHAL NVDPTVSSSN ASSPSDHDSI NDDHKDPVPS  120
DDHHHHTGAE TEGSLSQCKT EPLEAPPSNP NSAAKSGNRI LDPKRVKRIL ANRQSAQRSR  180
VRKLQYISEL ERSVTSLQAE VSVLSPRVAF LDHQRLLLNV DNSALKQRIA ALAQDRIFKD  240
AHQEALRREI ERLRQVYHQQ SLKKTVNSHQ ADGAPATDLK PSGETERLLN V
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010524047.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1553372e-38AC155337.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH117N09, complete sequence.
GenBankAC1892202e-38AC189220.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB010H06, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010524047.10.0PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K41e-126BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A087H4K21e-128A0A087H4K2_ARAAL; Uncharacterized protein
STRINGXP_010524047.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-116bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]