PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010112889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | G2-like | ||||||||
Protein Properties | Length: 283aa MW: 31205.2 Da PI: 8.4503 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 45.2 | 2.1e-14 | 66 | 95 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk++l +m+vkg+tl+h+kSHLQkYRl XP_010112889.1 66 GATPKSLLGVMGVKGITLYHLKSHLQKYRL 95 59***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.5E-12 | 65 | 96 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.3E-9 | 66 | 96 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MRGNNGKFSA INDSLKEQCH VEVSIFWSQK ATTTATAAAM ASSTPMEWRS THNRSLHDEI 60 GRVTRGATPK SLLGVMGVKG ITLYHLKSHL QKYRLGKYSI KEWTQVPKKG SSSSLDITTL 120 GFLPCHQAEG YELIDEGLEL QKEIQAKLNL KIEASLQITT SHKDPELAER RLQMCQEAER 180 RYLNTALGTA RKMLANPYVM SATAGTGVVF EQDVTDLGTT PQRETHSLAG DSQTPYGNFA 240 SLSSEAFPSL AQGRKKRVQS LDEDPAETYL ILDNTQSGKQ NGI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010112889.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | W9SC84 | 0.0 | W9SC84_9ROSA; Uncharacterized protein | ||||
STRING | XP_010112889.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18901 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 5e-18 | G2-like family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21400712 |