PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010112624.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 330aa    MW: 37489.8 Da    PI: 6.1483
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010112624.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.4e-30135193259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eH h+
  XP_010112624.1 135 ADMWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSPSNPEIFVITYTAEHSHT 193
                     69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-30120195IPR003657WRKY domain
PROSITE profilePS5081131.364129195IPR003657WRKY domain
SuperFamilySSF1182904.58E-25130195IPR003657WRKY domain
SMARTSM007742.0E-34134194IPR003657WRKY domain
PfamPF031062.9E-25136192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MDHQGWDLID VVRGNSNNNM ESFMSTNIRE SATSCFVPRS VQENDDLFCA YPHLFETTTA  60
FDELEDLYKP FYPVLHSPFS SPSTPLASCI SLPQQAEINV PQKIKKVKEA ASKYKKRKNQ  120
QKKVVKQVKE DGLCADMWAW RKYGQKPIKG SPYPRSYYRC SSSKGCSARK QVERSPSNPE  180
IFVITYTAEH SHTHPTRRNS LAGSTRSKFP ASKMAFRQLD IDHKSSTSDD LDIVDQKDHE  240
LVQNESSTKR ENEEVVLDHG ECSSETINVM PKPNHVMLGH DQMFPSLEDL ERGLEELDGG  300
FLDGFADDHD HFIDANWFVD HYSTTLAGAC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-17125195877Probable WRKY transcription factor 4
2lex_A4e-17125195877Probable WRKY transcription factor 4
5w3x_B3e-171351961780Disease resistance protein RRS1
5w3x_D3e-171351961780Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00448DAPTransfer from AT4G23550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010112624.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010112624.10.0WRKY transcription factor 22
TrEMBLW9SBD80.0W9SBD8_9ROSA; Putative WRKY transcription factor 29
STRINGXP_010112624.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62173150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.15e-33WRKY family protein