PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106856.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 355aa    MW: 39593.1 Da    PI: 6.0859
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106856.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.1e-13151202155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  XP_010106856.1 151 QRMTHIAVERNRRKQMNEYLAVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 202
                     79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.97E-14149206No hitNo description
SuperFamilySSF474596.41E-17150218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.231150201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-14150206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-10151202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-10156207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MALEAVVFPQ NPFSYSAYNM LGGSNNWSYD GLISLEKDHD HDHHNIQEQS AGNSFDFLEN  60
QTESSTTTCT TPYGDHHNWN PSASSMVPHF NDLHLSSTVP SPDGTTTVNA NGDFQPFDLS  120
TDAMIMPITS STRPKRRRSR SRKNKEDIEN QRMTHIAVER NRRKQMNEYL AVLRSLMPDS  180
YVQRGDQASI IGGAINFVKE LEQQVQFLGV QKEIKRQGSD GGVSDAPFSE FFTFPQYSTS  240
SGTSKTYHDS NPVAMAGTGE TSSAIADIEV TMVESHANIK IRSKRRPKQL LKMVSGLQSM  300
RLTVLHLNVT TEQAIVLYSL SVKVEDDCKL TSVDDIATAV YQILARIQEE TLMAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151162RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106856.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106856.10.0transcription factor bHLH94
TrEMBLW9SJQ30.0W9SJQ3_9ROSA; Uncharacterized protein
STRINGXP_010106856.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-83bHLH family protein