PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010100563.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Dof

Protein Properties

Length: 319aa MW: 35662.5 Da PI: 7.6335

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010100563.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.7	1.6e-35	55	113	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++ lkcprC+stntkfCyynny+ sqPr+fC+aC+r+WtkGG+lrnvPvGggr++nk+ XP_010100563.1 55 SEPLKCPRCESTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNNKRP 113 6789************************************************9999975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-21	56	103	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-31	57	112	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.903	58	112	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	60	96	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MGLSSKQVVI SRDGLDWSQT LLHDQSLEHH HHKPPSSSSS SWKMRRNQQQ NQNQSEPLKC 60 PRCESTNTKF CYYNNYNKSQ PRHFCRACKR HWTKGGTLRN VPVGGGRKNN KRPNKKSSAS 120 SAAATATATS TMFQAKQPIV LENNISSVLP NNNLLLGDHH QDHEKSTSEI LSQAVLIHPQ 180 SLNIMSDFDN ESLISTKTDP TKPFFSNPSL HANFPPNQGL QFQAFSSSTS SPFESSLSSI 240 SNSFQASNFV CDYGDDQMKL MGDQATITSS CTVQPPWQVP PATSNGMDLP NYWNWDDIDT 300 LVSVDHINLP WDDAHDFKP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010100563.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010100563.1	0.0	dof zinc finger protein DOF1.1
TrEMBL	W9RD26	0.0	W9RD26_9ROSA; Dof zinc finger protein
STRING	XP_010100563.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5107	33	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	4e-25	Dof family protein

Link Out ? help Back to Top
Entrez Gene	21395349