PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100453.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 466aa    MW: 52774.1 Da    PI: 7.5997
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100453.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.7e-10282329355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++ + Er+RR+ri+ a  +Lr+l+P+      +K++ a+i   Av+YI++Lq
  XP_010100453.1 282 STNLISERNRRKRIKMAQLTLRSLVPNI-----TKMDTASIIGDAVNYIRELQ 329
                     567789*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142154.9E-1610149IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000834.80E-9277326No hitNo description
SuperFamilySSF474591.57E-14277343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.875279328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-12281347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-7282329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-12285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MSEQVVEWFR PLLGAQQWDY VVVWKLGDDP SRFIEWMGCC CSGGNVKEER TENSHLSSLC  60
RDTCLKHPVR TKACEALSQL PSSMPLYSGV HTDVVISRQP RWLSQVEGSD SYPSHNFSGT  120
LALIPVEDGL IELYATKNIP KNQKVLELIL AHCNSSLKQE NLDILPQKCV QKQPSFSNLL  180
SLGPRSGVFQ QVSRSGSHTS TEGPSNASSS NISNEHLLFG SNCVYESQYQ PYKSSYENTS  240
ELKKLDYNED FLKQQSSLVS GCEAEKTAKK VTKRKERGSY KSTNLISERN RRKRIKMAQL  300
TLRSLVPNIT KMDTASIIGD AVNYIRELQK EEKELQEELK KMEEEEEKEL QKSKDRLAIP  360
ESNEAKFVTS CLPPAANNPT FGQKMKTEMQ VDVKQVGKRE CFIKVFYEHM QGSFVRLMEA  420
IDSIELQVVN CNLTTFNGRV QNILEVKADK DIQAVRLKNL LIELVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1272293KRKERGSYKSTNLISERNRRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100453.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100453.10.0transcription factor bHLH90
TrEMBLW9RCQ00.0W9RCQ0_9ROSA; Uncharacterized protein
STRINGXP_010100453.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF122653033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.15e-68bHLH family protein