PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100064.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CO-like
Protein Properties Length: 482aa    MW: 52572.8 Da    PI: 6.1964
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100064.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.59.6e-071352437
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                      C+ ++e+ + l+C+ ++  lC  C ++ H+       H
  XP_010100064.1 13 VPCDFCSEQTAVLYCRADSAKLCLFCDQHVHSAnllsrkH 52
                    67***************************99545555555 PP
2zf-B_box19.71.7e-065599340
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40
                     ++C+++++++++  C + +  lC+dC    H +       H+++
  XP_010100064.1 55 SQICDNCGSEPVSVRCSTENLVLCHDCDWDAHGScpsvsasHDRT 99
                    579************************999994477777777766 PP
3CCT64.82.5e-22434477144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk++
  XP_010100064.1 434 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAS 477
                     7789**************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.6131057IPR000315B-box-type zinc finger
SMARTSM003368.9E-121057IPR000315B-box-type zinc finger
CDDcd000211.84E-71345No hitNo description
PROSITE profilePS501199.21453101IPR000315B-box-type zinc finger
CDDcd000211.67E-65786No hitNo description
PfamPF062031.9E-16434476IPR010402CCT domain
PROSITE profilePS5101714.912434476IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MVSPKSGSQN DGVPCDFCSE QTAVLYCRAD SAKLCLFCDQ HVHSANLLSR KHLRSQICDN  60
CGSEPVSVRC STENLVLCHD CDWDAHGSCP SVSASHDRTS LDGFSGCPSA LQLASLWGLD  120
LTDPTRLGPK SGSGELGGLR FQDVVVPGED QNGVVCGRKR KKKRVMYKQL AELLRRECLV  180
VGGGGEIIAA EEEEALCLGN NGDDRDVEDG DNGVLLGDSG IGIDQVDQPF LQQLQHHQAP  240
FTSLLMMSPP PPPQQQQRAD QLKDSGGGTS GGVFHDHGDI LWDITNPNNN APTTQIWDFH  300
LGRSMVHEEP EVDFGANDEG FMIKNFGELV KEASLTNTKM LGDNIYHINF PAPHDHEITI  360
NNNATASQGP GTSESNNLPI GRPSCASAFS KSIGSSALKD SMDFMEGPFL VRSDTMKTTA  420
VATKVDLEML AQNRGNAMQR YKEKKKTRRY DKHIRYESRK ARADTRKRVK GRFVKASDAP  480
AS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161RKRKK
2157163RKRKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100064.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100064.10.0zinc finger protein CONSTANS-LIKE 15
TrEMBLW9S0M00.0W9S0M0_9ROSA; Zinc finger protein CONSTANS-LIKE 14
STRINGXP_010100064.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47372843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33500.11e-93B-box type zinc finger protein with CCT domain