PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098522.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 291aa    MW: 32373.7 Da    PI: 4.9601
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098522.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.7e-07205246955
                     HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      r RR++i ++ +eL +l+P  +      K+s ae+ + A +YIk Lq
  XP_010098522.1 205 ARERRRKITEKTQELGKLVPGgN------KMSTAEMFQAAYKYIKFLQ 246
                     699*****************955......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.932196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-12197254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-11201254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.52E-8202250No hitNo description
SMARTSM003534.6E-9202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-5206246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MALSFLSNLW NSSASPQQKQ NPDIVGFQQR KKPRFSNLSF SNTYSNPCPL IIQNDDNNSF  60
FSHHNNVYTS TSTNYSHFLP TSSNNNNAFF NSLSSPQTLF PLEELEYNPY PYSSRVSDQF  120
FDGFSASPDL FPELLTDEDR ILLAPLLREP QVICDFPVQQ DNDVVYDCGN SYDDAHHQEI  180
NTTELKKGSS GGSSSTAVSP QSVAARERRR KITEKTQELG KLVPGGNKMS TAEMFQAAYK  240
YIKFLQAQVS VLQSIDNSGD EARTIAYQRT ASLNIAGCSA EVVLGREVLG S
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098522.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098522.10.0transcription factor bHLH52
TrEMBLW9R7P60.0W9R7P6_9ROSA; Uncharacterized protein
STRINGXP_010098522.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-17bHLH family protein