PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096349.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 604aa    MW: 66151.6 Da    PI: 6.4724
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096349.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.1e-30305364159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+
  XP_010096349.1 305 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCAEDMSILITTYEGTHNHP 364
                     58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.0E-32290366IPR003657WRKY domain
SuperFamilySSF1182903.01E-27298366IPR003657WRKY domain
PROSITE profilePS5081128.575300366IPR003657WRKY domain
SMARTSM007742.1E-36305365IPR003657WRKY domain
PfamPF031069.7E-27306364IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    Send to blast
MKQDKKEMGS KINGDEEDTS SVINKERDGC QVVVLEQNIN LEPSSPSGNN DLAIIKEETA  60
ATKSNNATDP SKWETNSDHS SPSILKNEQE DKLKSAYKAQ MGEVREENER LKLLLVRIMT  120
DYKSLQSQFS DILRQQEAKP KPINDHCKSP DDDHHHHQPA APHDDDQLVS LSLGRISSTA  180
KDEPIKNDEI IMKETSSWSN IDHKDHDQDQ GLNDGDQLAL ALGSLSETTK NSNSDNSFDH  240
DHKEVQKELD GEDVEPSEMW PPSKVRKTAR SRGTDHEDHD DSVSQTSPLK KARVSVRARC  300
DAPTMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVSPTCPVR KQVQRCAEDM SILITTYEGT  360
HNHPLPISAT AMASTTSAAA SMLQSHSTTS SSQPPLLLPS AILPGPISAA TSSKTNFPPG  420
LNFNTATATT TNLFQNSLIR SSPQHQFYFP NTSISTHNSH PTVTLDLTLP NHHYSSHDIL  480
GRGLSSNTRS YPSTCLSFSS SSSSSSSLEP IISNPYNGYL NYRNYPVGSN GNYNKQLFYQ  540
PYLNSSSSTT TNNNNQISTA LTNQQSLTET IAAATKAITS NPNFKSALAA ALTSFVGNGG  600
SHGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-20292366174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096349.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2297656e-86KP229765.1 UNVERIFIED: Boehmeria nivea WRKY transcription factor-like (WRKY36) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096349.10.0probable WRKY transcription factor 72
TrEMBLW9RC210.0W9RC21_9ROSA; Putative WRKY transcription factor 72
STRINGXP_010096349.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-49WRKY DNA-binding protein 72