PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094329.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 351aa    MW: 39335.4 Da    PI: 5.8443
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094329.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.27.8e-181560148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ T+eE+e +v++++ +G++ W++Ia++++ gRt++++k++w+++l
   XP_010094329.1 15 RGNITAEEEETIVKLHNAFGNR-WSLIAEHLP-GRTDNEIKNYWNSHL 60
                     7999******************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-5321IPR009057Homeodomain-like
SuperFamilySSF466894.67E-17364IPR009057Homeodomain-like
PROSITE profilePS5129425.451064IPR017930Myb domain
SMARTSM007171.5E-171462IPR001005SANT/Myb domain
PfamPF002498.8E-161560IPR001005SANT/Myb domain
CDDcd001678.75E-121960No hitNo description
Gene3DG3DSA:1.10.10.602.6E-222260IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MLLRWINYLR ADLKRGNITA EEEETIVKLH NAFGNRWSLI AEHLPGRTDN EIKNYWNSHL  60
SRKSYSFSKQ LGKESSTMVL NNITKLAARN RRSGSARTRR SAAKMHKNMN TDSTAKMSPI  120
KPETGHLMTV PDHHQVVESL ATDQKPNTSI FPGTNLGKVE KSKLLGLENY SLGTKEQENG  180
TDCSEKQTQS EEKEKLGPNE CVDREVKSLN CVIKGGVLDQ PSGDIALKEQ KECVNESCTA  240
NEGRESEEVK RDLSNEATKE RSSSLSRSNG DQSGEWHTFC SSAMNSGFDG DGSWLDWNWE  300
CFVESHNDNN VWDLSDYEGE SVFSLWESGI TGGYLGNDPA EKVLQVAQKH N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-1346348107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010094329.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019979.10.0transcription factor MYB111
TrEMBLW9QVY10.0W9QVY1_9ROSA; Transcription factor
STRINGXP_010094329.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.11e-33myb domain protein 111