PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093634.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 278aa    MW: 30829.4 Da    PI: 9.9416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093634.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08183223954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_010093634.1 183 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 223
                     699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434174223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-14175233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-14178232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.5E-6184223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.68E-6197228No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDVDMIKLSS STAGDHHQQQ QLDMMTIMMQ MEKPNPDHDH QLICDVPYQN TTPPPPTFLD  60
INFSEPNIFH NPNVVSSPSS SVQTTTLLNL ASSSVSFMGN PIQEPVTPPL QPMRFKTGGA  120
MPNMSNNNNI PHPYDKRSNS MAAMREMIFR IAAMQPIHID PESIKPPKRR NVKISKDPQS  180
VAARHRRERI SERIRILQRL VPGGTKMDTA SMLDEAIHYV KFLKKQVQTL EQAGANRPAV  240
GPGGAVGFAA GPAHLAAGNL NYYAFLKAYQ PNSAPMLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093634.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093634.10.0transcription factor HEC2
TrEMBLW9QU070.0W9QU07_9ROSA; Uncharacterized protein
STRINGXP_010093634.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-42bHLH family protein