PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093526.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 366aa    MW: 39969.9 Da    PI: 9.7072
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093526.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.3e-31293350359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYeg+Hnh+
  XP_010093526.1 293 DEYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPAMLIVTYEGDHNHT 350
                     9*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.5E-16244289IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.4E-33279351IPR003657WRKY domain
PROSITE profilePS5081130.125286352IPR003657WRKY domain
SuperFamilySSF1182901.57E-26288350IPR003657WRKY domain
SMARTSM007744.3E-38291351IPR003657WRKY domain
PfamPF031069.1E-27293349IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MAVELMMGFG IDSFAANTTT NMEENAVKEA ASAGIQSVEK FLRLVSQQNH HQQYHQDVTE  60
YREVADVAVN KFKKVISLLD KGRTGHARFR RAPLSLPSSS SPPSDHAPTQ ENPSGSSVLE  120
VIPINHQKPE HGGSAFKVYC PTPVLRLPPL PHNHNQQVQP RHNHHHQVNN APSLLGKNGS  180
VDKKESGTTI NFSPSPSISA ANSFMSTLTG DTDSTIQPSL SSGFQLTNLS QSSGKPPLSS  240
SSYKRKCSSV DDAALRCGSS SERCHCSKKR KSKVKRVIRV PAISMKMADI PPDEYSWRKY  300
GQKPIKGSPH PRGYYKCSSL RGCPARKHVE RALDDPAMLI VTYEGDHNHT QSVSEATASA  360
LVLESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20279349271WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093526.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093526.10.0probable WRKY transcription factor 7 isoform X2
SwissprotQ9STX01e-117WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLW9SE620.0W9SE62_9ROSA; Putative WRKY transcription factor 7
STRINGXP_010093526.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21773486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.19e-90WRKY DNA-binding protein 7