PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010087230.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 268aa    MW: 30581.3 Da    PI: 5.812
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010087230.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.7e-3056114259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  XP_010087230.1  56 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCKTDDSLLIITYTSSHNHP 114
                     699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-3149116IPR003657WRKY domain
SuperFamilySSF1182906.54E-2652116IPR003657WRKY domain
SMARTSM007745.4E-3555115IPR003657WRKY domain
PROSITE profilePS5081130.54956116IPR003657WRKY domain
PfamPF031066.4E-2557114IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MDDSLSLKLD SEVLPKELRP QSHASKKRKV VEKTVVKVRI GTNKVGKLLK NEGPPSDFWS  60
WRKYGQKPIK GSPYPRGYYR CSTSKGCSAK KQVERCKTDD SLLIITYTSS HNHPGPDISN  120
ATTTLTKEQQ EKQSKDQEDH DHHDLPPPMV QEEKNQSELE KDDQDHFHYI QSPIRCSQDI  180
VIGLEEEDPL IEKTTICDTL LGGTFPLDEE PLINVSRTHQ LLCFSKPKIS EENNDFFDEL  240
EELPTSSSFT GFMRSHLSDE IRIPFVPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-21561161779Disease resistance protein RRS1
5w3x_D7e-21561161779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010087230.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010087230.10.0probable WRKY transcription factor 65
TrEMBLW9QCS60.0W9QCS6_9ROSA; Putative WRKY transcription factor 35
STRINGXP_010087230.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-33WRKY DNA-binding protein 35