PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010086697.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bZIP
Protein Properties Length: 429aa    MW: 46485.4 Da    PI: 6.5635
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010086697.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.1e-10230288563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+     l++e+
  XP_010086697.1 230 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAEN 288
                     9*********************************************9998888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.8E-16226290IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932228291IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-10230284No hitNo description
PfamPF001701.1E-8230284IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-10230281No hitNo description
CDDcd147031.32E-25231280No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MDKDKSPGHG GGLPPPSGRY SGFSPGGSGF NVKSEPSSSS FPPLAPGGSS DVGHFGHGLS  60
ADSGRFSHDI SRMPDNPPRK LGHRRAHSEI LTLPDDISFD SDLGVVGGAD GPSFSDETEE  120
DFFSMYLDMD KFNSSSATSA FQVGESSSSA ATAAMIAAPA LGAATSSAEV AGSGSNERPR  180
VRHQHSQSMD GSTTIKPEML VSGSEEISSA DSKKAMSAAK LAELALIDPK RAKRIWANRQ  240
SAARSKERKM RYIAELERKV QTLQTEATSL SAQLTLLQRD TNGLTAENSE LKLRLQTMEQ  300
QVHLQDALND ALKEEIQHLK VMTGPGLPNG GPMMNFSSFG AGQQYYPNNH AMHTLLTAQQ  360
QFQQLQIHSQ KQQQQLHQFQ QHQLHQLQQQ QMQQEQQQPQ QSGDLKIRGT MPSPSHKETA  420
SDINSPETL
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010086697.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010086697.10.0probable transcription factor PosF21
SwissprotQ040881e-155POF21_ARATH; Probable transcription factor PosF21
TrEMBLW9QIN90.0W9QIN9_9ROSA; Putative transcription factor PosF21
STRINGXP_010086697.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-150bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]