PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009791614.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 400aa    MW: 44786.3 Da    PI: 4.8496
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009791614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.1e-1689134352
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                      kGVr +k +g+++AeIrdps+    kr++lg+f+t + Aa+a++a + +
  XP_009791614.1  89 PKGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFDTVKAAAEAYDAKKAE 134
                     79****99.**********964...3*******************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.93888150IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-1588135IPR016177DNA-binding domain
PfamPF008478.5E-1088134IPR001471AP2/ERF domain
PRINTSPR003671.8E-689100IPR001471AP2/ERF domain
SMARTSM003803.1E-1790147IPR001471AP2/ERF domain
CDDcd000183.55E-1990130No hitNo description
Gene3DG3DSA:3.30.730.108.8E-2090136IPR001471AP2/ERF domain
PRINTSPR003671.8E-6111127IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MMSNKERVND GCTGSVRKVR IIYDDPDATE SESENDHNIG NVVRIKRVVK EVNISSASLE  60
KKDSEKCSVK SSNKSLENKR VQIKSSSLPK GVRMRKWGKY AAEIRDPSQG KRIWLGTFDT  120
VKAAAEAYDA KKAEFDRRNL SERDKNLSSP RAPPECSTAC SSHPTNRTSS LYSHPSPSSV  180
LDVPTSSAAA AVECIDIPMK DTNRVPVLEV EQPASEIVEK QFFWPPSGCQ DLNLRFEDQM  240
LYEDPLIEQG TISNNLVEMT EFNITKTTKA RQPTIKICQK STKGIEDRRL NCTGQSITSP  300
SISAELKMMN FEETAVSGNN LKLLGFDENA LFGKDFTQTF DPYTDFIGLD SNFLCCDGLE  360
EFVYGMNEDF RDNVGANSPK LDDVELRWLD EVLIQDQSVL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791614.10.0PREDICTED: ethylene-responsive transcription factor CRF6-like
RefseqXP_016474894.10.0PREDICTED: ethylene-responsive transcription factor CRF6-like
TrEMBLA0A1S4AE410.0A0A1S4AE41_TOBAC; ethylene-responsive transcription factor CRF6-like
TrEMBLA0A1U7XXB20.0A0A1U7XXB2_NICSY; ethylene-responsive transcription factor CRF6-like
STRINGXP_009791614.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127181519
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-18ERF family protein