 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009629925.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
ERF |
| Protein Properties |
Length: 363aa MW: 40164.4 Da PI: 9.5063 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009629925.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 66.1 | 7e-21 | 145 | 194 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a++k++g
XP_009629925.1 145 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEDAAIAYDEAALKFRG 194
7********.**********76....35*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006970 | Biological Process | response to osmotic stress |
| GO:0009749 | Biological Process | response to glucose |
| GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MCILKVANFR NKANYKPIKD DEARNINVMF SGINREEEMS VMVSALTRVV RGEDKVLNQG 60
EGCDNIGAAN SGFSPSLNAI SGVVGEKRGR EEQSGQLFLS DIRSSGGESS NIRPIASNTP 120
TTESTFLYIT PTYGEGNTNH QPRRRYRGVR QRPWGKWAAE IRDPYKAARV WLGTFDTAED 180
AAIAYDEAAL KFRGSKAKLN FPENVKLLPT SSTHERSPLK LYSHQNTVGN LRFSTSTLDS 240
VENTRVSNST ISHDYTPNTL YSTTVSSFTN NYPIIHTQPN YNNTNISPQN FLNDDFQRLQ 300
PPSSLLNQLQ YLSSSSSSSS SSSSQLPFLP RMFFQGSQTT SQSSGSGFRA TSPDSTYVPP 360
SSR
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CU856251 | 2e-75 | CU856251.8 S.lycopersicum DNA sequence from clone LE_HBa-70F1 on chromosome 4, complete sequence. |
| GenBank | HG975516 | 2e-75 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |
