PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009624616.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 202aa MW: 24010.3 Da PI: 8.6672

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009624616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43	9.9e-14	57	115	3	61
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +lk+ rr +NR++A+rsR +K ++i eLe+kvk L+ L e+e++k++ l++ XP_009624616.1 57 DLKKLRRTVSNRLSAQRSRIKKTEYITELEKKVKDLQDTIAYLSPEIENYKEKQTMLRM 115 79*************************************************99877766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.4E-8	55	119	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.323	57	120	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-12	58	116	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.64E-12	58	114	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.9E-13	59	116	No hit	No description
CDD	cd14703	2.07E-10	60	111	No hit	No description
PROSITE pattern	PS00036	0	62	77	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
MEDKRKRSEP ELALSLKSPT DNQDELPVNR RKVPLTLDQA IDFELNKPGR NVDSDVDLKK 60 LRRTVSNRLS AQRSRIKKTE YITELEKKVK DLQDTIAYLS PEIENYKEKQ TMLRMQRKYL 120 QEQLDSFTDR SKLRTVQIEE MKLELRRLKE LAKAQEEHYN MQLGQTSNYF YQSEMELQQA 180 AAGIDQYLNL DVMNFYPPKN EM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019248575.1	1e-135	PREDICTED: basic leucine zipper 19-like
TrEMBL	A0A1J6ICT6	1e-134	A0A1J6ICT6_NICAT; Uncharacterized protein
STRING	XP_009624616.1	1e-144	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7615	19	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	8e-11	bZIP family protein