 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009616468.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
ERF |
| Protein Properties |
Length: 214aa MW: 23915.9 Da PI: 9.7092 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009616468.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.3 | 1e-19 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++kGVr++ +g+Wv+eIr+p kr++lg+f taeeAa+a+++a+ ++g
XP_009616468.1 5 KKFKGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDEAAILMNG 55
59*****999.**********8.....335**********************98876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MVQSKKFKGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDEAA ILMNGQVAKT 60
NFPIVKENHV NNSNDKKFPL SSSSTLSTVL NAKLRKCCKY PAPSMTCLRL DNDNCHIGVW 120
QKRSGKNSGS NWITKIELGK KEEPHQSHES MNSWSLSSSS GSTSSSSSSE LGISKPLDEE 180
NRAAMQMVEE LLYWNSPFSS APISDLSPSF SNSK
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 9e-17 | 5 | 64 | 1 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 5wx9_A | 1e-16 | 6 | 63 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15319479}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves. {ECO:0000269|PubMed:15319479}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975445 | 1e-103 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |
| GenBank | HG975518 | 1e-103 | HG975518.1 Solanum lycopersicum chromosome ch06, complete genome. |
