PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009615010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 114aa MW: 13562.1 Da PI: 8.9793 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 25.8 | 2.1e-08 | 94 | 113 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 Dgy+WrKYG+K+vk++++ XP_009615010.1 94 YDGYKWRKYGKKKVKSNTNL 113 5***************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.7E-8 | 81 | 114 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.15E-7 | 86 | 113 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 10.338 | 88 | 114 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.6E-5 | 95 | 114 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MTQDCGYNFQ DWDFNNFQDF ESSSFLDQLL VDYSPTNNNF NTSLSENPNM QEISSTNINR 60 LKEKAEEGKK KEKMNERHVQ AIAFRTKTQL EILYDGYKWR KYGKKKVKSN TNLR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975451 | 9e-35 | HG975451.1 Solanum pennellii chromosome ch12, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009615010.2 | 3e-80 | PREDICTED: probable WRKY transcription factor 45 | ||||
TrEMBL | A0A1S4D1X9 | 9e-77 | A0A1S4D1X9_TOBAC; probable WRKY transcription factor 45 | ||||
STRING | XP_009615010.1 | 1e-79 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14192 | 10 | 13 |