PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009607149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 500aa MW: 55554.9 Da PI: 6.2046 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.8 | 2.4e-28 | 40 | 161 | 10 | 129 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvg 101 deel+ +yL kk+ +++++ +++evd++ ++P++L +++ ++ k+wyf s++++ky++g ++n a ++gyW+ g+d +++ +g+l+g XP_009607149.1 40 ADEELIIHYLDKKMMDQPFPN-YTVHEVDVFLYHPQKLSqMHHPSQAKKWYFLSPASNKYTEGGQSNGvsANNDGYWEPCGTDSLIHK-DGKLIG 132 59****************999.67**************8446666888**************999998545679***********999.99**** PP NAM 102 lkktLvfykgr.apkgektdWvmheyrle 129 +ktL + g+ +++ ++t+W+mheyrle XP_009607149.1 133 YRKTLNYIAGKlDKDRKRTEWLMHEYRLE 161 ********9862455679*********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 34.594 | 31 | 182 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-15 | 40 | 160 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.68E-33 | 41 | 182 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence Send to blast |
MEGKGKQDST ANVTNVNKNC ADIGVIPKQE VLVDDQLSGA DEELIIHYLD KKMMDQPFPN 60 YTVHEVDVFL YHPQKLSQMH HPSQAKKWYF LSPASNKYTE GGQSNGVSAN NDGYWEPCGT 120 DSLIHKDGKL IGYRKTLNYI AGKLDKDRKR TEWLMHEYRL EGSRDVPTSD DMQRVFCKLF 180 KSNNKLMAAE EKEATKFAAP NDGVSGADPT IQGPENANDI TNDKGPSNGH SRDLLPMPET 240 DQDTTMPTPT PQHVQGTTLT RTGRQKATNN VVRNKRPRRK RDSHPPPASH QGLMMPHLPN 300 ANSQPQRDQG IRLPPPLPQN DERKTLPIST GPYKANNGVV VTDNGPSNSL VVPCCPEYIL 360 DEPSFDWTVA NSWLQDGTVL PSRPQHGQQT ILPSLTGNNT NADEVSVIGL TLNHLRDAQD 420 LPSSVQLPKL PSVQASPRGS HENEAAVAPR YDGWPLHTAE TRLPPFDGPF ESLTEEELAF 480 FDKPDPGYPE AFENKKEAKK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-20 | 41 | 184 | 27 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-20 | 41 | 184 | 27 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-20 | 41 | 184 | 27 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-20 | 41 | 184 | 27 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swm_B | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swm_C | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swm_D | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swp_A | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swp_B | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swp_C | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
3swp_D | 4e-20 | 41 | 184 | 30 | 170 | NAC domain-containing protein 19 |
4dul_A | 4e-20 | 41 | 184 | 27 | 167 | NAC domain-containing protein 19 |
4dul_B | 4e-20 | 41 | 184 | 27 | 167 | NAC domain-containing protein 19 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 275 | 279 | RPRRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009607149.1 | 0.0 | PREDICTED: uncharacterized protein LOC104101418 isoform X1 | ||||
Refseq | XP_009607150.1 | 0.0 | PREDICTED: uncharacterized protein LOC104101418 isoform X1 | ||||
TrEMBL | A0A1S3Z2F1 | 0.0 | A0A1S3Z2F1_TOBAC; uncharacterized protein LOC107782254 isoform X1 | ||||
STRING | XP_009607149.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15035 | 6 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 4e-24 | NAC family protein |