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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_008239968.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
TCP |
Protein Properties |
Length: 415aa MW: 44493.8 Da PI: 7.7309 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008239968.1 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 120.1 | 2.6e-37 | 88 | 205 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88
++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa p + ++ g ++++a+++ + s +ss+s+ s +
XP_008239968.1 88 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQADPPVTAARGPGTTPANFTsLNISLRSSGSSMSVPsqlrssy 182
789*************************************************************9999999987777777777666664444455 PP
TCP 89 ......................k 89
+
XP_008239968.1 183 yspnfsvhqnqrrslfqgiglsS 205
55555555555333333333321 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MEGGDQDHQL HHHHHHHYQQ QQHHHRPNFP FQLLEKKELD QEAASCSNST SPYPSLAITT 60 VDPATAITTT TTTTSTLQAS AEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ 120 LTRELGHKSD GETIEWLLQQ ADPPVTAARG PGTTPANFTS LNISLRSSGS SMSVPSQLRS 180 SYYSPNFSVH QNQRRSLFQG IGLSSSDSSS TLLNFQTNSM HASMLQAKQE LRDTVSLDLS 240 ETASGEGSMG GRKRRPPEQD LNQMGGGGGG GGGGYLLQSS TGAVPASHHH SQIPANFWMV 300 ANSNNQVMSG DPIWTFPASV NNSGLYRGTM PGGLHFMNFP APMTLLPSQQ QLGGSGGGGG 360 GNDGDNMSDG QLNMLAGLNP YRHMSSTGVS ESQQASGSHS HHGGDDRHDS TSHHS
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G47620.1 | 3e-43 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |