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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_008230794.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
NAC |
Protein Properties |
Length: 351aa MW: 40210 Da PI: 7.0925 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_008230794.1 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 180.5 | 4.3e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeel+++yL +kv ++ + + ++i evd++k+ePwdLp k+k +e+ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++
XP_008230794.1 16 LPPGFRFHPTDEELISHYLSPKVLDSCFCA-RAIGEVDLNKCEPWDLPWKAKMGEREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIYK- 108
79************************9888.89***************888999****************************************. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
++lvg+kktLvfykgrapkgekt+Wvmheyrle
XP_008230794.1 109 AKTLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142
999*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
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to blast |
MENAYGFSKE DEQMELPPGF RFHPTDEELI SHYLSPKVLD SCFCARAIGE VDLNKCEPWD 60 LPWKAKMGER EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIYKAK TLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR LEGKYSAYNL PKTAKNEWVI CRIFQKSSGG KKTHISGLVR 180 LGSFGNELRP SLLPPLMDSS PYNSDTRTTV CETSHVSFSD PMEDQRTQDD IIDSFQHNNH 240 HNSSNSNHNP LLASSSRSNP SAHLNPFYSN QITPNIGFLQ HQDSLLMQDQ SFLRMLLDNQ 300 APNLRRSAKT ELSQDTGLSM DVSSVVSNRE MVQDDPSYSS APIEYDSLWN Y
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-54 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-54 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-54 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-54 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_B | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_C | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_D | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_A | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_B | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_C | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_D | 3e-54 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
4dul_A | 3e-54 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 3e-54 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KR822711 | 0.0 | KR822711.1 Prunus persica NAC transcription factor NAC4 (NAC4) mRNA, complete cds. |