PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008225238.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

BES1

Protein Properties

Length: 323aa MW: 34505.5 Da PI: 8.6522

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008225238.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	218.9	1.1e-67	3	146	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g s+sasp+ss+q XP_008225238.1 3 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIMGGSTSASPCSSYQ 97 5899***************************************************************************************** PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 +sp++sy++sp+sssfpsp+++ + + +a +sl+p+l++ls+ sss+ XP_008225238.1 98 --------PSPCQSYNPSPASSSFPSPARYPANANGNAdaNSLIPWLKTLSSGSSSA 146 ........*****************99887665566********9977765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.0E-66	4	140	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MMTSGTRMPT WKERENNKKR ERRRRAIAAK IYSGLRMYGN YKLPKHCDNN EVLKALCNEA 60 GWTVEEDGTT YRKGCKPVDR MDIMGGSTSA SPCSSYQPSP CQSYNPSPAS SSFPSPARYP 120 ANANGNADAN SLIPWLKTLS SGSSSATSKL PQLFIQGGSI SAPVTPPLSS PTSRTPRTKS 180 DWDEAVAGSN WAGQNYPFLP SSTPPSPGRQ VLPDSGWLAG LQIPQSGPSS PTFSLVSRNP 240 FNLKEALSGG GSRMWTPGQS GTCSPVVAAS VDHSGDVPMS DGMAAEFAFG SNTSGLVKPW 300 EGERIEECVS DDLELTLGSA RTR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-24	7	78	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-24	7	78	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-24	7	78	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-24	7	78	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008225238.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007211637.1	0.0	BES1/BZR1 homolog protein 4 isoform X1
Refseq	XP_008225238.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4 isoform X1
Refseq	XP_008225239.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4 isoform X2
Refseq	XP_020418322.1	0.0	BES1/BZR1 homolog protein 4 isoform X2
Refseq	XP_021813187.1	0.0	BES1/BZR1 homolog protein 4-like isoform X1
Refseq	XP_021813188.1	0.0	BES1/BZR1 homolog protein 4-like isoform X2
Swissprot	Q9ZV88	1e-127	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	M5WHT3	0.0	M5WHT3_PRUPE; Uncharacterized protein
STRING	XP_008225239.1	0.0	(Prunus mume)
STRING	EMJ12836	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2661	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	7e-92	BES1/BZR1 homolog 3