PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004507453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bHLH | ||||||||
Protein Properties | Length: 363aa MW: 40983.9 Da PI: 6.3783 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.7 | 5.7e-10 | 169 | 216 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_004507453.1 169 SHSLAERVRREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 216 8**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.01E-16 | 163 | 234 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.50E-9 | 163 | 220 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.6E-17 | 165 | 232 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.364 | 165 | 215 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.9E-7 | 169 | 216 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.0E-9 | 171 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MLHCLNTSAN LGGGATVSDM TVLERQRARR KWQHEHEHEH EQEQDYHGYF CGNGFSSSHQ 60 IMMVNGCDSA LDEVVVNTKK RKAMNSKVVV VAEESDDDNK DKRIKVSAEE EDESKITEQT 120 KGHKTTKFNK NNRENSAQTS KENSKVSENQ NQKLDYIHVR ARRGQATDSH SLAERVRREK 180 ISERMKYLQD LVPGCNKIAG KAGMLDEIIN YVQSLQRQVE FLSMKLAAVN PRLDFNIDEL 240 FAKEVFPQNF PSIGMQSDMA NPSYLNFNSS QQLVSSLSYC GGIINNIGLM PPDIDIRRNI 300 NAPASLPEMF VDSSCFTHIL PSSTLEGDFQ NLHNVIFDQG RSTSFPSQPF TGLIEASNLK 360 MEM |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004507453.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004507453.1 | 0.0 | transcription factor bHLH63 | ||||
TrEMBL | A0A1S2YNE0 | 0.0 | A0A1S2YNE0_CICAR; transcription factor bHLH63 | ||||
STRING | XP_004507453.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3618 | 34 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 2e-60 | cryptochrome-interacting basic-helix-loop-helix 1 |