PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004497097.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 365aa    MW: 40938.9 Da    PI: 4.5089
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004497097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-17113162255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr +k +g+W+AeIrd +     + +r++lg++ taeeA +a++  r ++e 
  XP_004497097.1 113 KYRGVRMRK-WGKWAAEIRDpF-----KgARIWLGTYNTAEEASQAYESKRIEFER 162
                     8******99.**********55.....45**********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.69E-23112160No hitNo description
PfamPF008477.0E-11113162IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.0E-21113162IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-16113160IPR016177DNA-binding domain
PROSITE profilePS5103219.599113173IPR001471AP2/ERF domain
SMARTSM003803.3E-17113167IPR001471AP2/ERF domain
PRINTSPR003676.9E-10114125IPR001471AP2/ERF domain
PRINTSPR003676.9E-10136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MVESRKQSVS RAKHRTHPLK ESKIMSRKLR IIYDDPDATD TSDDESDSRK IKRSVVEIPL  60
PLLSAVSFSS ENSFCEKEKI TKKKTCHSVQ PHIKKRSVSS TPATPTRRQS NAKYRGVRMR  120
KWGKWAAEIR DPFKGARIWL GTYNTAEEAS QAYESKRIEF EREAKAKSEA NAANNNGDGS  180
FTQENKSSYS NSPSADAVAA TTFSVSEKFS TTEDSESLFS HTSPSSVLEL DTSASHLMEP  240
EKPDVSSSNE AMEEADEEAS ELVALQLEEL EIPDLSVLNL PEPSMVDIDA PSGCDPNLGF  300
DFDRFTFDDY RHGFEDFGDF RDIHIHGFDD NEPSELPDYD FADMGADDEF AGWIEEPLYN  360
NIPCA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-111111541256Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004497097.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004497097.10.0ethylene-responsive transcription factor ERF118
TrEMBLA0A1S2XZX00.0A0A1S2XZX0_CICAR; ethylene-responsive transcription factor ERF118
STRINGXP_004497097.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.27e-27ERF family protein