PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004493506.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | C2H2 | ||||||||
Protein Properties | Length: 255aa MW: 28517.7 Da PI: 8.4974 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.00032 | 198 | 220 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kCp C+ Fs+ +L+ H ++ H XP_004493506.1 198 KCPQCSAKFSSVTSLVDHVKKvH 220 7*******************999 PP | |||||||
2 | zf-C2H2 | 14.8 | 8.2e-05 | 230 | 251 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C+k F ++ +L++H + H XP_004493506.1 230 CPKCSKGFLDPASLVKHVDRdH 251 *****************99888 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF118310 | 1.15E-11 | 6 | 51 | No hit | No description |
Gene3D | G3DSA:4.10.1110.10 | 9.9E-10 | 10 | 52 | IPR000058 | Zinc finger, AN1-type |
PROSITE profile | PS51039 | 7.497 | 10 | 59 | IPR000058 | Zinc finger, AN1-type |
Pfam | PF01428 | 8.4E-12 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00154 | 0.0075 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
Gene3D | G3DSA:4.10.1110.10 | 2.5E-10 | 91 | 149 | IPR000058 | Zinc finger, AN1-type |
SuperFamily | SSF118310 | 8.44E-9 | 93 | 145 | No hit | No description |
PROSITE profile | PS51039 | 7.711 | 98 | 147 | IPR000058 | Zinc finger, AN1-type |
Pfam | PF01428 | 4.9E-8 | 101 | 141 | IPR000058 | Zinc finger, AN1-type |
SMART | SM00154 | 0.54 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
PROSITE profile | PS50157 | 9.93 | 197 | 225 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.0081 | 197 | 220 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13894 | 1.3E-4 | 198 | 220 | No hit | No description |
SuperFamily | SSF57667 | 1.31E-5 | 198 | 247 | No hit | No description |
PROSITE pattern | PS00028 | 0 | 199 | 220 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.494 | 228 | 255 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 2.7 | 228 | 251 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 230 | 251 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MGTPEFPDLG KHCAVSHCRL IDFLPFTCDR CNQVYCLEHR SYIKHHCTKP NKNDITVVIC 60 PLCAKGVRLI PDKDPNIVWE NHVNTDCDPS NYDKVTKKKK CPAPGCRETL VFSNTIKCRD 120 CEVEHCLKHR FGADHKCSGP KKLETSFSFM SSLLNNRSNS KEDSKPNSSK WTSSLIDLAS 180 KLGGEINQAW QSFQVEEKCP QCSAKFSSVT SLVDHVKKVH QVKKVPISAC PKCSKGFLDP 240 ASLVKHVDRD HGGSS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May be involved in environmental stress response. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004493506.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004493506.1 | 0.0 | zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 | ||||
Refseq | XP_012569287.1 | 0.0 | zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 | ||||
Swissprot | Q8VZ42 | 1e-104 | SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 | ||||
TrEMBL | A0A1S3E0J7 | 0.0 | A0A1S3E0J7_CICAR; zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 | ||||
STRING | XP_004493506.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5864 | 33 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57480.1 | 1e-101 | C2H2 family protein |