PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00028418-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 567aa    MW: 61993.6 Da    PI: 6.3327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00028418-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.15.7e-11405463563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR +A rs  RK  ++   e k++ L++eN++L +e+ +l+ e+ +lkse+
  WALNUT_00028418-RA 405 KRAKRVLANRMSAARSKDRKTRYTTDIEHKAQILQTENTTLSNEVTKLQRESTELKSEN 463
                         9********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-15401465IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.737403466IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10405461No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-11405461No hitNo description
PfamPF001701.8E-10405463IPR004827Basic-leucine zipper domain
CDDcd147031.89E-16406457No hitNo description
Gene3DG3DSA:3.40.470.106.6E-4472549IPR005122Uracil-DNA glycosylase-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MQAGHQSAFR VKSQNQSDMK NFNASQMGFP VRQLPENLSP GGSENGNKRP GIPPSHPINP  60
ASLLQYSQFV GSSPASGQWS SQNLSPGISH SRSLSQPTFF ALDSLLPPLS PLPYSEPSTS  120
SLSDPISMDV SMEESAVNSH ALSLPSPING GNAFRVGEGL PPRRGHRRSN SDGIPLGFST  180
MIQSSPQLTP IGSWGVLDQS ISGSENSGVD KPIQLVLKGE LKRDRAGNNI ANGTDEGISE  240
GVVLDDFFNE FMNLENIDNM NSYGTEEKDM DGRANGSKMK GCDGSDNEVE SRKNDCLNCV  300
QGSSSSFANE KREGKRIASG DTKPTVRHSR SVSMDSYMGN LHFDDESPKL PPIGTQVGQQ  360
SPSNAPEGSS TKFCMGFGNG HFNEAELEKI RENAKLAEIA LSDPKRAKRV LANRMSAARS  420
KDRKTRYTTD IEHKAQILQT ENTTLSNEVT KLQRESTELK SENNELRFRL QAMEQESKLK  480
NALQEALRAE VQHLRLSAVK CGGEGYLAHC MAQQLSIDQQ MFQLQHPHHT QVNHSTWEQH  540
VLPQLPHHGG LEPQQENGDV AQQEANT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018811154.10.0PREDICTED: uncharacterized protein LOC108983832
TrEMBLA0A2I4DVI10.0A0A2I4DVI1_JUGRE; uncharacterized protein LOC108983832
STRINGXP_009337668.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.32e-91bZIP family protein