PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027829-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 348aa    MW: 39147.4 Da    PI: 9.8997
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027829-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31282339359
                         -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  WALNUT_00027829-RA 282 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 339
                         99***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.1E-17233278IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.8E-33268340IPR003657WRKY domain
PROSITE profilePS5081129.953275341IPR003657WRKY domain
SuperFamilySSF1182903.27E-27278340IPR003657WRKY domain
SMARTSM007742.0E-38280340IPR003657WRKY domain
PfamPF031062.9E-27282339IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEEVEEANKA AVNCCHRVLS LLSQPQDQVQ CKNLMVETGE AVFRFKKVVS LLNTGLGHAR  60
VRKLKKLHIP FPQGILLENP NCRTDQQPKN HQFLQSSFPE NPIQEIGSHV KSNLCLGNPS  120
LELSSNGKSP LQLSHQTPSS HYHFLQQQQH QQHQQRLLLQ QQQMKHQAEM MYRRSNSGIN  180
LNFDSSSCTP TMSSTRSFMS SLSIDGSVAN LDASAFHLIG APHSSDQNSQ QHKRKCSARG  240
DDGSVKCGSS GRCHCSKKRK HRVKRSIKVP AISNKLADIP PDDYSWRKYG QKPIKGSPHP  300
RGYYKCSSMR GCPARKHVER CLEEPSMLIV TYEGEHNHPR LPSQSTTT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-20273342775WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018807117.10.0PREDICTED: probable WRKY transcription factor 21
RefseqXP_018807118.10.0PREDICTED: probable WRKY transcription factor 21
RefseqXP_018858075.10.0PREDICTED: probable WRKY transcription factor 21
RefseqXP_018858076.10.0PREDICTED: probable WRKY transcription factor 21
SwissprotO043361e-128WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A2I4DIZ70.0A0A2I4DIZ7_JUGRE; probable WRKY transcription factor 21
STRINGXP_008235315.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26373479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-112WRKY DNA-binding protein 21