PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00021711-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 449aa    MW: 49620.6 Da    PI: 7.2404
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00021711-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.3e-10164204545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  WALNUT_00021711-RA 164 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 204
                         788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-7153207No hitNo description
SMARTSM003382.7E-9160223IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415162206IPR004827Basic-leucine zipper domain
CDDcd147084.65E-21164216No hitNo description
SuperFamilySSF579596.88E-7164207No hitNo description
PfamPF001702.6E-7164204IPR004827Basic-leucine zipper domain
PROSITE patternPS000360167182IPR004827Basic-leucine zipper domain
PfamPF141443.1E-32246321IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MGSRTVKIGA EDDSRVMTGM PSFVPAIPNS NSLGTEGNTI RSSQLTDFGT FEQSLGFRIE  60
DAVGLNPVYN QMKSSSQALG TDIQFATLNK TLQLQKEPQA NLVSTSGGHR ENWGESTMAE  120
ASPRTDTSTD DTDDKNQRHE MGQLIGVAAS DSSDKSKEKS GDQKTLRRLA QNREAARKSR  180
LRKKAYVQQL ESSRLKLTQL EQELQRARQQ GIFISSSGDQ SHSMSGNGAL AFDVEYARWL  240
EEQNKQINEL RAAVNSHAAD AELRTIVDNV IAHFDDIFRL KGIAAKADVF HILSGMWKTP  300
AERCFMWIGG FRSSELLKLL VNQLEPLTEQ QLVGIYNLQQ SSQQAEDALS QGMEALQQSL  360
AETLANGSPS PSGSSGNVAN YMGQMAMAMG KLGTLEGFLR QADNLRQQTL QQMHRILTTR  420
QSARALLAIN DYFSRLRALS SLWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018814127.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2I4E4080.0A0A2I4E408_JUGRE; transcription factor TGA2.3-like isoform X1
STRINGVIT_08s0007g05170.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-138bZIP family protein