PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00014184-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

bZIP

Protein Properties

Length: 259aa MW: 28775.4 Da PI: 9.9769

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00014184-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.8	5.4e-14	199	247	4	52
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++r +rk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke ++ WALNUT_00014184-RA 199 DRRLKRKIKNRESAARSRARKQAYHNELVSKVSHLEEENIKLKKEKVRI 247 7899***************************************996665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.2E-9	196	253	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.565	198	243	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.8E-12	199	244	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.17E-17	200	242	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.0E-12	200	245	No hit	No description
SuperFamily	SSF57959	1.06E-10	200	244	No hit	No description
PROSITE pattern	PS00036	0	203	218	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence Send to blast
MGIQTMGSQG NGQQPHLQPS PLTRQSSWYN LTLNEVKNQL GDMGKPVGSM NLDELLQKVW 60 AAEANQSMEM DNDNSSSASS FQREASATLA RALSGKTVDQ VWTEIQQGRN KRYGEGPKGQ 120 DSNMKLGETT LEDFLVQAGL FAQAFVGPTM GLDIVEAVTP QNFPQKMGLS SSPSTCSLSD 180 TTAPGWKRTA SDTFEKTLDR RLKRKIKNRE SAARSRARKQ AYHNELVSKV SHLEEENIKL 240 KKEKVRIKAF HHGDKFIMS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018831017.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
Swissprot	Q9LES3	2e-53	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2I4FH92	0.0	A0A2I4FH92_JUGRE; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
STRING	EMJ07855	1e-132	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF12464	25	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	5e-42	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]