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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vradi11g09920.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
ERF |
| Protein Properties |
Length: 271aa MW: 30234.8 Da PI: 6.5137 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi11g09920.1 | genome | SNU | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.2 | 8.7e-18 | 49 | 98 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g
Vradi11g09920.1 49 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 98
59*******.**********93....35999**********************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MEEAMRRLNG VAPILGPDPK DSSLGENPKR STAVNKRTLR EDGGGGAMRY RGVRRRPWGR 60
YAAEIRDPQS KERRWLGTFD TAEEAACAYD CAARAMRGLK ARTNFVYPTS PQASSATADH 120
FFHSFSDDDS GSGFFCRESS DSGLLEEIVN KFLPKAKPNK CESLPKMESV RNPQEPVLPS 180
LISESALVST AQCYDDTKKG FQKNESFGLS FDHQDLPMQK FDNFNGFHHL QGMALGNEQT 240
MTNHAENCIV EDVFQYQELL NSFAIRMQNA *
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| Functional Description ? help
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| Source |
Description |
| UniProt | Required for correct embryo patterning and cotyledon organogenesis. May regulate positively the gibberellin signaling pathway leading to germination, hypocotyl elongation, and leaf expansion. Involved in the cytokinin signaling pathway that promotes shoot regeneration, probably through transcriptional activation of target genes such as CUC1. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16339853, ECO:0000269|PubMed:17056621, ECO:0000269|PubMed:17376809}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 0.0 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
| Publications
? help Back to Top |
- Chandler JW,Werr W
Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
J. Exp. Bot., 2014. 65(12): p. 3097-110
[PMID:24744428] - Thoma R,Chandler JW
Polarity in the early floral meristem of Arabidopsis.
Plant Signal Behav, 2015. 10(4): p. e992733
[PMID:25806573] - Comelli P,Glowa D,Chandler JW,Werr W
Founder-cell-specific transcription of the DORNRÖSCHEN-LIKE promoter and integration of the auxin response.
J. Exp. Bot., 2016. 67(1): p. 143-55
[PMID:26428063] - Seeliger I, et al.
The AP2-type transcription factors DORNRÖSCHEN and DORNRÖSCHEN-LIKE promote G1/S transition.
Mol. Genet. Genomics, 2016. 291(5): p. 1835-49
[PMID:27277595] - Chandler JW,Werr W
DORNRÖSCHEN, DORNRÖSCHEN-LIKE, and PUCHI redundantly control floral meristem identity and organ initiation in Arabidopsis.
J. Exp. Bot., 2017. 68(13): p. 3457-3472
[PMID:28859377] - Durán-Medina Y,Serwatowska J,Reyes-Olalde JI,de Folter S,Marsch-Martínez N
The AP2/ERF Transcription Factor DRNL Modulates Gynoecium Development and Affects Its Response to Cytokinin.
Front Plant Sci, 2017. 8: p. 1841
[PMID:29123539]
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