PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang09g05580.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 513aa    MW: 56539.2 Da    PI: 8.7471
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang09g05580.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.99.9e-29268326259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrC++   Cpv+k+v+r+ +d++v+++tYeg+Hnh+
  Vang09g05580.1 268 GDGCQWRKYGQKTAKGNPCPRAYYRCSMGtACPVRKQVQRCFKDETVLITTYEGSHNHP 326
                     69**************************98****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.6E-31253328IPR003657WRKY domain
SuperFamilySSF1182902.09E-26260328IPR003657WRKY domain
PROSITE profilePS5081128.747262328IPR003657WRKY domain
SMARTSM007743.3E-33267327IPR003657WRKY domain
PfamPF031062.4E-25269326IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
DSAEISSINA VDYTHYIVKP QKFGKQIKVS GKITYIYGYL ISPSLSSGNH QRNMEEKSSL  60
KNLLKDEERP YDCNTTGNGT DEPFLHNTMG SSVLSLNLNN SGQPLNQMGM LRIKLEEAKK  120
ENEILKTMLT KVNEHCTVLQ NRILFEMQQH QLSPSVINKN NNHESQITKK VVYLLKGKIQ  180
DVEKPMLHTR QFLNIGDCSS LSEGYTEKVE KKTLDRSLAC EKKNIVEGEM NTKIALHEAK  240
CIEDQTSEVT CRRAKVSIRA RSDFSLMGDG CQWRKYGQKT AKGNPCPRAY YRCSMGTACP  300
VRKQVQRCFK DETVLITTYE GSHNHPLPLA ARSLASSTSA ALNMFLSGSL TSSVGTTTLP  360
NSPLFSSSLS SVSPTAVATF SHSATCPTVT LDLTQPNNNN NYLQFQRATT SHPFFPLPLH  420
DHPHQGLPLL CSKVPTFLSP DKNLALVDVV SQAITKDPSL KAALFSAISS LTGDSQKNSN  480
NHTPHSKSSS GYDPCSKMPA IPPHQPCSTE LI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20254328174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang09g05580.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017406100.10.0PREDICTED: WRKY transcription factor 6-like
TrEMBLA0A0L9T6Q90.0A0A0L9T6Q9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RHH40.0A0A0S3RHH4_PHAAN; Uncharacterized protein
STRINGXP_007138579.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139451122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.13e-46WRKY family protein