PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DS_985883968.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 559aa    MW: 60403 Da    PI: 4.5676
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DS_985883968.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM124.59.1e-39271588128
                    NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdke 91 
                            +Ptdeelv +yLk+k++g+ ++   +i++vd+  vePwdLp +  +k+++ ew+fF++rd+ +   +++r+ r+t++gyWkatgkd+ 
  Traes_7DS_985883968.2  27 RPTDEELVRHYLKAKIAGRAHPDLLAIPDVDLAAVEPWDLPaRsVIKSDDPEWFFFARRDRPKYpgKSSRSCRSTAAGYWKATGKDRL 114
                            7*******************999899***************5347777888********9855435678999**************** PP

                    NAM  92 vlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            + +        kg+l+g+kktLvf++grap+g +t W+mhey++
  Traes_7DS_985883968.2 115 IRAPgpggcrgKGALIGVKKTLVFHRGRAPRGARTPWIMHEYTA 158
                            **9999999888889***************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100545.57720189IPR003441NAC domain
PfamPF023653.0E-2127157IPR003441NAC domain
SuperFamilySSF1019411.24E-4227189IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MTTTAAGSES SSSSTXXXXX XXXXXXRPTD EELVRHYLKA KIAGRAHPDL LAIPDVDLAA  60
VEPWDLPARS VIKSDDPEWF FFARRDRPKY PGKSSRSCRS TAAGYWKATG KDRLIRAPGP  120
GGCRGKGALI GVKKTLVFHR GRAPRGARTP WIMHEYTATD PNPQSQSQSQ SQSAGPQNDS  180
FVLYRLFNKQ DEETPAPISG PPSTSPPANP PLQQADDTAS ASMVEDKASP SDSSQLTPTN  240
ATTDHSSTAH LPAAAGDAEQ TADQEAAFTA SLEQLPDIQL QAEQQRHDEF PIFNSPMRPY  300
TDLPFVGNMG DEQEDFSMYL NNTIGEQDVQ DMLLNPAGST TAPLPFWSAS SGSWTPYDLQ  360
DMGAAPWTQQ QPTAPADLMD PQQGIAARRI RLAYAVERAS ASQPVLACHS ESEEGEGESA  420
GCSTESSSSN HEEDHVDDAV FQTMAGDLMH NMAPAQALVV SPVQVADKLE HLSFNLNDNN  480
ILEQEDAKLP GGAVLKQDSG RNGHDQDGLV RNSDCVPGPG DSSSETAVRR SLWLALLVMA  540
PLLVLVLAGV WRSLSYRPV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-302819223171Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020171646.10.0uncharacterized protein LOC109757228
TrEMBLA0A3B6TAX10.0A0A3B6TAX1_WHEAT; Uncharacterized protein
STRINGTraes_7DS_985883968.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134132529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.35e-50NAC transcription factor-like 9
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]