PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7DL_A8C4FFABB.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 299aa    MW: 32324.7 Da    PI: 11.2246
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7DL_A8C4FFABB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.22.3e-219815870128
                    NAM  70 tgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            + +r+ r+t++g+Wkatg+d++v ++   ++lvglkktLv+y+grap+g+ktdWvm+eyrl
  Traes_7DL_A8C4FFABB.1  98 RCRRRXRTTERGFWKATGSDRAVRCAadPKRLVGLKKTLVYYQGRAPRGTKTDWVMNEYRL 158
                            45688899****************98777788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.0718180IPR003441NAC domain
SuperFamilySSF1019417.59E-2595180IPR003441NAC domain
PfamPF023651.2E-9102158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
LADLSHGAAR RSGGAVAGAA GVPLPPHGGG AAGVLPQAPC HPKQQAAAPQ GGAVRHHPHG  60
APVPARPLGP PGARRHRQRA RVVLLRAPRR RPEARVRRCR RRXRTTERGF WKATGSDRAV  120
RCAADPKRLV GLKKTLVYYQ GRAPRGTKTD WVMNEYRLPD LSGAGAGEQQ DVVLCKVYRK  180
AVSLKELEQR VAMEELARAR SSPPTTASHS HSHSHCSAGS PDVSSASELA HEAALHHVHH  240
GVKKEEAVAV ARPPAMRQLE TAKANGGLEW MQDPFLTQLR SPWMEGLCLS PYYASVLNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-1610118388168NO APICAL MERISTEM PROTEIN
1ut4_B7e-1610118388168NO APICAL MERISTEM PROTEIN
1ut7_A7e-1610118388168NO APICAL MERISTEM PROTEIN
1ut7_B7e-1610118388168NO APICAL MERISTEM PROTEIN
3swm_A8e-1610118391171NAC domain-containing protein 19
3swm_B8e-1610118391171NAC domain-containing protein 19
3swm_C8e-1610118391171NAC domain-containing protein 19
3swm_D8e-1610118391171NAC domain-containing protein 19
3swp_A8e-1610118391171NAC domain-containing protein 19
3swp_B8e-1610118391171NAC domain-containing protein 19
3swp_C8e-1610118391171NAC domain-containing protein 19
3swp_D8e-1610118391171NAC domain-containing protein 19
4dul_A7e-1610118388168NAC domain-containing protein 19
4dul_B7e-1610118388168NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9676331e-116EU967633.1 Zea mays clone 304978 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175218.11e-130NAC domain-containing protein 35-like
SwissprotQ10S653e-57NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A3B6TTD81e-129A0A3B6TTD8_WHEAT; Uncharacterized protein
TrEMBLA0A453TB031e-129A0A453TB03_AEGTS; Uncharacterized protein
STRINGTraes_7DL_A8C4FFABB.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.17e-33NAC domain containing protein 36
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]