PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_3ED7A9663.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 84aa    MW: 9778.28 Da    PI: 11.329
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_3ED7A9663.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_159.28.5e-191269360
                           XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                           e+ r++r+++NRe+A rsR+RK+a++eeLe++v  L   N +Lkk+ +elk eva+l+
  Traes_7AL_3ED7A9663.1 12 EDPRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLKLKKQCKELKREVAALT 69
                           6789***************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-151074IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-171168No hitNo description
PROSITE profilePS5021711.5071268IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.24E-131568No hitNo description
PfamPF001701.8E-151568IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MELRQGGGSS GEDPRTIRMM RNRESALRSR ARKRAYVEEL EKEVRRLVDD NLKLKKQCKE  60
LKREVAALTL PTKSSLRRTS STQF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2490122e-84AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177215.11e-51protein FD-like
TrEMBLA0A3B6RPT45e-51A0A3B6RPT4_WHEAT; Uncharacterized protein
TrEMBLA0A446XZM65e-51A0A446XZM6_TRITD; Uncharacterized protein
STRINGTraes_7AL_3ED7A9663.18e-53(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.13e-10bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]