PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5BL_E294922A9.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 379aa MW: 41048.8 Da PI: 9.1918 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93 | 2.3e-29 | 307 | 365 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YYrC+s +Cp++k+ver++ d ++++tYe++Hnh Traes_5BL_E294922A9.2 307 SDSYSWRKYGQKPIKGSPHPRGYYRCSSIkDCPARKHVERCRGDAGMLIVTYENDHNHA 365 69************************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 4.8E-7 | 251 | 304 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 1.2E-32 | 295 | 367 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.274 | 301 | 367 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.14E-26 | 304 | 367 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-35 | 306 | 366 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.6E-25 | 308 | 364 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MEGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAVAAETE EAVSRFSKVV NILGNRVGHA 60 RARVGRRSSP AGDPIARCLL EYHPPPPVPY CPPASAPQLH GSSSSTPAPP TPLKQMAVPV 120 AAAAAPCATD RDMFFQTPLL DLSGCSVTPA SMPPCRSTAR EFPQQQPAPP QKRMLEQQQR 180 PASSDNKRFH FEPKPASEKP FHIEIPAARS GKEPEVITFS FDNSVCTSSA ATSFFTNMSS 240 QLISMSETSA CAPASRKAAH KADDDGKCHC PKKKSVPVAY AIDLLKPREK RVVRMPAVSD 300 KVADIPSDSY SWRKYGQKPI KGSPHPRGYY RCSSIKDCPA RKHVERCRGD AGMLIVTYEN 360 DHNHAQPLDL ATLTANSEV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 4e-19 | 304 | 367 | 12 | 74 | WRKY transcription factor 1 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370043 | 1e-148 | AK370043.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2104B06. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020156284.1 | 1e-136 | probable WRKY transcription factor 15 | ||||
TrEMBL | A0A446URA9 | 0.0 | A0A446URA9_TRITD; Uncharacterized protein | ||||
STRING | Traes_5BL_E294922A9.2 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12705 | 30 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 2e-44 | WRKY DNA-binding protein 7 |
Publications ? help Back to Top | |||
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