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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_5BL_A848F629F.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 311aa MW: 34193.8 Da PI: 8.15 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_5BL_A848F629F.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.9 | 1.5e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd l+ +++q G+g +W + ++++g++R++k+c++rw++yl
Traes_5BL_A848F629F.1 14 KGPWSPEEDATLKSYIEQNGTGgNWIALPQKIGLRRCGKSCRLRWLNYL 62
79*********************************************97 PP
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2 | Myb_DNA-binding | 37.6 | 5e-12 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
++ eEd +++ + G++ W+ Ia+ ++ gRt++++k++w++
Traes_5BL_A848F629F.1 70 GFSDEEDRIILSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
699*****************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MGRAPCCDKA SVKKGPWSPE EDATLKSYIE QNGTGGNWIA LPQKIGLRRC GKSCRLRWLN 60 YLRPNIRHGG FSDEEDRIIL SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGK 120 QSRKDQRQHQ FARQAANGGH KEEASEGVAG NNGFAAGAYN WHQHGMAMPP RPMPGSMVEG 180 NRIGEGVDES IRKLLFKLGG SSFAALPAPP CLPPSMYGEA PNFVAPSVHT APLNEGGIHC 240 SGVLPALELD ESFQFNQVKL DGLECFFGMG DQSMRWNEVS PLVCPNTTVA SSSQAMQQYC 300 LVEEPVDLGM Q
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK364805 | 0.0 | AK364805.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2028I14. |