PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_1AE458202.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 446aa    MW: 48548.3 Da    PI: 10.2846
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_1AE458202.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.4e-31323378156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W+peLH++Fv a++qLGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
  Traes_5BL_1AE458202.2 323 KTRRCWSPELHRHFVAALHQLGGPQVATPKQIREVMKVDGLTNDEVKSHLQKYRLH 378
                            68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.772320380IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-28320381IPR009057Homeodomain-like
SuperFamilySSF466892.87E-16321380IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-25323378IPR006447Myb domain, plants
PfamPF002491.6E-6325376IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010092Biological Processspecification of organ identity
GO:0010629Biological Processnegative regulation of gene expression
GO:0048449Biological Processfloral organ formation
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
RQRTPGGRGA RRITVPSLSL SLSHTPPARA RPNKSCGPAR RFPLAVYICA HLPSRSPTTF  60
LSSSSSSSSN QTSSASQRYQ LPSFLPSSRK ISIGNGGVFT CCPRARVPVC VCMGLDVGEI  120
GMPLDLGLDL KLFVAKTAGR LAKEAPAVDA CIRGLEEERR KIEVFRRELP LCARLLADVI  180
EFMKEEAAKR SERRDADDND KRKWMSTAQL WVDTRATDAA DPVKEQKKES SLSKPMLLGG  240
AIGAPMAVSC RAMPPPAAPQ YFGRDDKIVG SQGLLALPMI SPAANRQFSP PADDRHQAFA  300
AKFAAPMPPP GPGLQTHDQQ SRKTRRCWSP ELHRHFVAAL HQLGGPQVAT PKQIREVMKV  360
DGLTNDEVKS HLQKYRLHNQ RSPSSSSASH PIMLVGDLWA HQEQSSSQSR SPEGPLQLSV  420
SGVAVSALTV SDSSEEDDRS VGYSRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-13323376154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-13323376154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-13323376154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-13323376154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-13323381260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00475DAPTransfer from AT4G37180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519440.0JF951944.1 Triticum aestivum clone TaMYB61 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199780.10.0uncharacterized protein LOC109785601
TrEMBLA0A446UNC70.0A0A446UNC7_TRITD; Uncharacterized protein
STRINGTraes_5BL_1AE458202.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.19e-41G2-like family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]