PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BS_BA032E4A1.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 331aa    MW: 36295.5 Da    PI: 6.7202
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BS_BA032E4A1.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.81.4e-1835117284
               trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                            Wt  e+++Liea+++++++   + l  ++W++v +++++ g++rs++qC+++w+nl ++ykk+++  +   ++++   p + +
  Traes_4BS_BA032E4A1.1  35 WTLPETMLLIEAKKRVHSERHPADLGLGRWRWVEDYCWRAGCRRSQNQCNDRWDNLMRDYKKVRAYGEHAGAGAEAPRPSYWE 117
                            ***************************************************************98766654555555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500908.1072791IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.603.8E-62993IPR009057Homeodomain-like
SuperFamilySSF466893.59E-73093IPR009057Homeodomain-like
PfamPF138371.9E-1333118No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDAKGSGGAH REGEETGNVM AGAMTVAREY RRGNWTLPET MLLIEAKKRV HSERHPADLG  60
LGRWRWVEDY CWRAGCRRSQ NQCNDRWDNL MRDYKKVRAY GEHAGAGAEA PRPSYWEMAR  120
AERKARYLPS NLLREIYEAM AEIVERRTGF SGAGGPFLGA PPPPMASTGL VGVPMQASPL  180
AQVQPRPLDQ EETRCSSESS PERKRLRLSL DGQPGSSRST PASDAGHNDR HQEPQGDDRE  240
VSSEDAEEQD ELSGAIGQCA AILSGALESR EAAEERRHRE VMAVEERRSV ARQARREAGE  300
QCMAGLAAAV GQLAGSMLAL AAKHEGPAAP K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200121.10.0trihelix transcription factor ASR3-like
TrEMBLA0A3B6IJ890.0A0A3B6IJ89_WHEAT; Uncharacterized protein
STRINGTraes_4BS_BA032E4A1.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32943571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.12e-41Trihelix family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]