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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_4AL_8B52D54FD.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 238aa MW: 27342.2 Da PI: 8.566 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_4AL_8B52D54FD.2 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.1 | 7.2e-17 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT++Ed++lv+ v+++G ++W+ +a+ g++Rt+k+c++rw +yl
Traes_4AL_8B52D54FD.2 10 KGPWTEQEDLQLVCTVRLFGDHRWDFVAKVSGLNRTGKSCRLRWVNYL 57
79********************************************97 PP
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2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 64 | 108 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
gr++++E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
Traes_4AL_8B52D54FD.2 64 GRMSPQEEHLIIELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 108
89*******************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MVTVQDEMRK GPWTEQEDLQ LVCTVRLFGD HRWDFVAKVS GLNRTGKSCR LRWVNYLHPG 60 LKHGRMSPQE EHLIIELHAR WGNRWSRIAR RLPGRTDNEI KNYWRTHMRK KAQERKIDMS 120 PSSSSSSFTY QSCLLETAPI IRMDGGSTHN GTTCFSSVLK SNQSVMDGYS MDQIWKEIEA 180 PAMLPIDDKA CSNLPCPLLP SPMGDRYCPP EVVWKMDNGD LKMLAPQFGY GNGERSCY
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK367218 | 0.0 | AK367218.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2053B03. |