PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_2BL_1E57B73B21.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 26086.3 Da PI: 10.3578 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 7.1e-17 | 71 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p + r+r++lg++ t+ Aa+a++ a +l+g Traes_2BL_1E57B73B21.5 71 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 120 7******99.**********732...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.08E-26 | 70 | 129 | No hit | No description |
SuperFamily | SSF54171 | 1.05E-21 | 71 | 130 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-30 | 71 | 129 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.6E-10 | 71 | 120 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.4E-35 | 71 | 134 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.589 | 71 | 128 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.4E-12 | 72 | 83 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.4E-12 | 110 | 130 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MQQGEYRSSS SSKGSAGSAA AAAAAAAAMA PLAAAAAAVA AKEEHNVTVA VAPPIPMAMA 60 MPLQQQQPRK QYRGVRMRKW GKWVAEIREP HKRTRIWLGS YATPVAAARA YDTAVFYLRG 120 RSARLNFPDE ISALALSSPE AAEAGAAGGE MAGELGDGGA LSAASIRKKA IEVGSRVDAL 180 QTGMTTMVAA PTHQRERQRL HHHHHAEPHG EELHRHVKQQ RTAWNGRAKN PDLNQAPSPD 240 TSDAE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 7e-15 | 70 | 133 | 4 | 68 | ATERF1 |
3gcc_A | 7e-15 | 70 | 133 | 4 | 68 | ATERF1 |
5wx9_A | 2e-14 | 71 | 132 | 14 | 76 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00276 | DAP | Transfer from AT2G23340 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK353807 | 0.0 | AK353807.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1002O02. | |||
GenBank | AK363075 | 0.0 | AK363075.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2012I21. | |||
GenBank | AK364443 | 0.0 | AK364443.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2025D07. | |||
GenBank | KC898798 | 0.0 | KC898798.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898799 | 0.0 | KC898799.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898800 | 0.0 | KC898800.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898801 | 0.0 | KC898801.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898802 | 0.0 | KC898802.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898804 | 0.0 | KC898804.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898805 | 0.0 | KC898805.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898806 | 0.0 | KC898806.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898807 | 0.0 | KC898807.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898808 | 0.0 | KC898808.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898809 | 0.0 | KC898809.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898810 | 0.0 | KC898810.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898814 | 0.0 | KC898814.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898815 | 0.0 | KC898815.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898816 | 0.0 | KC898816.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898817 | 0.0 | KC898817.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. | |||
GenBank | KC898818 | 0.0 | KC898818.1 Hordeum vulgare hypothetical protein (MLOC_81350.1) gene, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020191028.1 | 1e-100 | ethylene-responsive transcription factor ERF008-like | ||||
TrEMBL | A0A3B6CET9 | 1e-175 | A0A3B6CET9_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446MTS5 | 1e-175 | A0A446MTS5_TRITD; Uncharacterized protein | ||||
STRING | Traes_2BL_1E57B73B21.5 | 1e-176 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3943 | 30 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 3e-40 | DREB and EAR motif protein 3 |
Publications ? help Back to Top | |||
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