 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Traes_2AS_CD74215DB.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
Family |
MYB |
Protein Properties |
Length: 348aa MW: 37864.4 Da PI: 8.3946 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_2AS_CD74215DB.1 | genome | IWGSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 47.6 | 3.9e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l++ ++G+g +W + +++ g++R++k+c++rw++yl
Traes_2AS_CD74215DB.1 14 KGPWSPEEDAKLKEFMDKHGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62
79*********************************************97 PP
|
2 | Myb_DNA-binding | 34.9 | 3.6e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +T+ Ed + + G++ W+ Ia+ ++ gRt++++k++w++
Traes_2AS_CD74215DB.1 69 GEFTEHEDRVICSMYASIGSR-WSIIASQLP-GRTDNDIKNYWNT 111
78*******************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MGRAPCCDKN NVKKGPWSPE EDAKLKEFMD KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FTEHEDRVIC SMYASIGSRW SIIASQLPGR TDNDIKNYWN TKLKKKLMGS 120 TTMAGAGPPP RAPRQNHHQH RPVLLPYSSS PHSNYSNFFH GAGALLQQSA EPLTLQPQDH 180 YMLGSSGSLN PMGNSNGASA VQLQLLHATT AHRQLQVKEE CGSGGAMIAF GCGDQQSCSS 240 SDGTQYGGGQ YVHGGRHHGK EMSFDNNNGY SAYGVYGNGA GAVEQEHKLS FQLQHQQEQQ 300 QAQLDYSYEE IKQLLMTAAA SGADGLIHDS ELIGAHAAAA AAGKLTMM
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK368660 | 0.0 | AK368660.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2077K09. |