 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_2AS_4C9807337.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 239aa MW: 26110.6 Da PI: 9.8854 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_2AS_4C9807337.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52 | 1.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++e+de+l + v+q+G g+W++Ia+ g+ R++k+c++rw yl
Traes_2AS_4C9807337.1 14 RGLWSPEDDEKLMNHVAQYGYGCWSSIAKIAGLERCGKSCRLRWMHYL 61
788*****************************************9996 PP
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2 | Myb_DNA-binding | 40.6 | 6e-13 | 67 | 109 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g++++ E++l+++++ G++ W+ Ia+ ++ gRt++++k++w++
Traes_2AS_4C9807337.1 67 GPFSQGEEDLIIHLHSIRGNK-WSQIAAQLP-GRTDNEVKNFWNT 109
799******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MSKRPGATKK RLKRGLWSPE DDEKLMNHVA QYGYGCWSSI AKIAGLERCG KSCRLRWMHY 60 LTPDRGGPFS QGEEDLIIHL HSIRGNKWSQ IAAQLPGRTD NEVKNFWNTI IKKKLRQRRI 120 DPAIHKPLAH AGAAAAATPV TRTAVFSEAE LILSSPVGTQ PMPPLVSAES YVYSRGSMDG 180 AGGAHAALGG CSDDGSLSSL SGYNNNQKAD FPGYLDADAL HGAVIPSVWS SRTLNWWRA
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353785 | 0.0 | AK353785.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1002L23. |
GenBank | AK358210 | 0.0 | AK358210.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1071D01. |