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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Traes_2AL_097BADCFE.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family |
MYB |
| Protein Properties |
Length: 343aa MW: 37729.4 Da PI: 6.8756 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_2AL_097BADCFE.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEde+l+ ++++G g+W++ +++ g+ R++k+c++rw +yl
Traes_2AL_097BADCFE.1 14 KGPWTSEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 50 | 6.9e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l
Traes_2AL_097BADCFE.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-RRTDNEIKNYWNTHL 112
89********************.*********.************996 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MGRSPCCDKV GLKKGPWTSE EDEKLLAHIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY 60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLSRRT DNEIKNYWNT HLKKRLAKMG 120
IDPVTHKATN GAPVGTAASL NHMAQWESAR LEAEGRLARE SRMRTAASTP TSIPLHPINL 180
PEPTTPPCLG MLQPWQGAKL DLESPTSTLT FIGNNNSVSL GASESNSAMW KLRSDDPECE 240
ENSVHKFLRE QQMQGLEGEE RGRHIIGCEE PWFQGTVGVG AGFTDMLHDA LDCWGESSNG 300
QAELSGQVSG DGESGSSSYW SGILGMVVTS ELPPSHPHPP AFL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the control of epidermal cell morphogenesis in petals. Promotes unidirectional cell expansion once outgrowth has been initiated (PubMed:17376813). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). Functions as a major regulator of cuticle formation in vegetative organs by regulating the cuticle biosynthesis genes CYP86A8/LCR and CER1 (PubMed:24169067). {ECO:0000269|PubMed:17376813, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK248651 | 0.0 | AK248651.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf180h20, mRNA sequence. |
| GenBank | AK358325 | 0.0 | AK358325.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1073M23. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Brenchley R, et al.
Analysis of the bread wheat genome using whole-genome shotgun sequencing.
Nature, 2012. 491(7426): p. 705-10
[PMID:23192148] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Huang BH, et al.
Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae).
Int J Mol Sci, 2015. 16(3): p. 5900-21
[PMID:25782156] - Cui F, et al.
Dissecting Abscisic Acid Signaling Pathways Involved in Cuticle Formation.
Mol Plant, 2016. 9(6): p. 926-38
[PMID:27060495]
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