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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_1BS_B44ECE28C.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
Family |
MYB |
Protein Properties |
Length: 268aa MW: 30149.6 Da PI: 5.4627 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_1BS_B44ECE28C.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 43.9 | 5.4e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed +lv v++lG ++W+ a+ g++Rt+k+c++rw +yl
Traes_1BS_B44ECE28C.1 16 KGPWTENEDAQLVWFVRLLGERRWDFLAQVSGLRRTGKSCRLRWVNYL 63
79********************************************97 PP
|
2 | Myb_DNA-binding | 52.1 | 1.6e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rgr T++E+ l++ +++++G++ W++Iar+++ gRt++++k++w++++
Traes_1BS_B44ECE28C.1 69 RGRITADEERLILSLHAEWGSR-WSRIARKLP-GRTDNEIKNYWRTHM 114
899*******************.*********.************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MCNNSGGRGG AMAARKGPWT ENEDAQLVWF VRLLGERRWD FLAQVSGLRR TGKSCRLRWV 60 NYLHPGLKRG RITADEERLI LSLHAEWGSR WSRIARKLPG RTDNEIKNYW RTHMRKKAQE 120 EKMLAKNKAS SSPSSSSADS TSLTTTTCSA SPTATSSSAA TTEEAPQEST TSMDDEAEEE 180 AATSASEEKK AEVVQYCSPV DMDQLWNDIA ASERYPEMMM SWGVAGHVVM PAPAVEPSSP 240 VWEFCEDYSL WRIDDQEYYN KIDQHALN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF951904 | 0.0 | JF951904.1 Triticum aestivum clone TaMYB20 R2R3-MYB protein mRNA, complete cds. |